Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene/squalene synthase family protein | DC415_13180 | Not Available | Positive | 2837529 - 2838377 | 31053.4 |
| hypothetical protein | DC415_13185 | Not Available | Positive | 2838631 - 2839113 | 17650.0 |
| fadh(2)-oxidizing methylenetetrahydrofolate--trna-(uracil(54)-c(5))- methyltransferase trmfo | DC415_13190 | Not Available | Negative | 2839065 - 2840534 | 52457.9 |
| hypothetical protein | DC415_13195 | Not Available | Positive | 2840645 - 2840833 | 6778.35 |
| duf1127 domain-containing protein | DC415_13200 | Not Available | Negative | 2840830 - 2840973 | 5468.56 |
| is110 family transposase | DC415_13205 | Not Available | Negative | 2841332 - 2842252 | 33948.8 |
| duf1127 domain-containing protein | DC415_13210 | Not Available | Negative | 2842578 - 2842724 | 5623.79 |
| Trna-leu | Not Available | Not Available | Positive | 2843278 - 2843362 | Not Available |
| trigger factor | DC415_13220 | Not Available | Positive | 2843551 - 2845026 | 54058.9 |
| hypothetical protein | DC415_13230 | Not Available | Positive | 2846103 - 2846756 | 23496.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


