Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_13130 | Not Available | Negative | 2827328 - 2827885 | 19130.3 |
| tigr01620 family protein | DC415_13135 | Not Available | Negative | 2828014 - 2829090 | 38560.0 |
| amino acid regulated cytosolic protein | DC415_13140 | Not Available | Negative | 2829087 - 2830562 | 53591.1 |
| phosphohistidine phosphatase | DC415_13145 | Not Available | Negative | 2830664 - 2831173 | 18637.1 |
| rna polymerase-binding protein dksa | DC415_13150 | Not Available | Positive | 2831442 - 2831861 | 16134.8 |
| phna-like protein | DC415_13155 | Not Available | Negative | 2831980 - 2832879 | 30233.7 |
| aaa family atpase | DC415_13160 | Not Available | Negative | 2833032 - 2833907 | 32634.8 |
| preprotein translocase subunit yajc | DC415_13165 | Not Available | Positive | 2834142 - 2834498 | 12985.9 |
| protein translocase subunit secdf | DC415_13170 | Not Available | Positive | 2834562 - 2837123 | 92739.4 |
| hypothetical protein | DC415_13175 | Not Available | Positive | 2837123 - 2837515 | 13783.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


