Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | DC415_13030 | Not Available | Positive | 2805234 - 2806430 | 43358.9 |
| amino acid abc transporter permease | DC415_13035 | Not Available | Positive | 2806436 - 2807593 | 42484.4 |
| amino acid abc transporter atp-binding protein | DC415_13040 | Not Available | Positive | 2807605 - 2808378 | 29217.8 |
| universal stress protein | DC415_13045 | Not Available | Negative | 2808451 - 2809296 | 30533.3 |
| competence/damage-inducible protein a | DC415_13050 | Not Available | Negative | 2809416 - 2810189 | 27610.1 |
| nad(p)h:quinone oxidoreductase type iv | DC415_13055 | Not Available | Positive | 2810435 - 2811034 | 20843.7 |
| duf982 domain-containing protein | DC415_13060 | Not Available | Negative | 2811509 - 2811754 | 8686.28 |
| hypothetical protein | DC415_13065 | Not Available | Negative | 2811827 - 2812117 | 10776.0 |
| hypothetical protein | DC415_13070 | Not Available | Negative | 2812183 - 2812806 | 23090.2 |
| Trna-cys | Not Available | Not Available | Positive | 2812925 - 2812998 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


