Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcystin degradation protein mlrc | DC415_12880 | Not Available | Positive | 2776580 - 2778019 | 52091.2 |
| mfs transporter | DC415_12885 | Not Available | Positive | 2778245 - 2779489 | 43408.0 |
| copper homeostasis protein cutc | DC415_12890 | Not Available | Positive | 2779482 - 2780216 | 25939.4 |
| hypothetical protein | DC415_12895 | Not Available | Negative | 2780315 - 2781430 | 39770.5 |
| hypothetical protein | DC415_12900 | Not Available | Negative | 2781412 - 2781723 | 11436.0 |
| tail-specific protease | DC415_12905 | Not Available | Negative | 2782023 - 2783031 | 35961.6 |
| leucyl/phenylalanyl-trna--protein transferase | DC415_12910 | Not Available | Negative | 2783032 - 2783398 | 13528.3 |
| acetyl-coa carboxylase biotin carboxylase subunit | DC415_12915 | Not Available | Negative | 2783402 - 2784745 | 48859.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | DC415_12920 | Not Available | Negative | 2784757 - 2785239 | 16524.7 |
| type ii 3-dehydroquinate dehydratase | DC415_12925 | Not Available | Negative | 2785267 - 2785704 | 15403.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


