Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DC415_12830 | Not Available | Positive | 2766071 - 2766955 | 32783.8 |
| carbohydrate abc transporter permease | DC415_12835 | Not Available | Positive | 2766952 - 2767812 | 32059.1 |
| abc transporter substrate-binding protein | DC415_12840 | Not Available | Positive | 2767908 - 2769071 | 42436.4 |
| abc transporter atp-binding protein | DC415_12845 | Not Available | Positive | 2769199 - 2770317 | 40718.6 |
| microcystin lr degradation protein mlrc-like protein | DC415_12850 | Not Available | Negative | 2770457 - 2771932 | 52825.7 |
| hypothetical protein | DC415_12855 | Not Available | Negative | 2771967 - 2772455 | 18455.6 |
| reactive intermediate/imine deaminase | DC415_12860 | Not Available | Positive | 2772568 - 2772954 | 14143.9 |
| rpir family transcriptional regulator | DC415_12865 | Not Available | Positive | 2772965 - 2773831 | 31748.1 |
| short-chain dehydrogenase | DC415_12870 | Not Available | Positive | 2773836 - 2774618 | 27240.4 |
| beta-n-acetylhexosaminidase | DC415_12875 | Not Available | Positive | 2774646 - 2776565 | 70937.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


