Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_12780 | Not Available | Positive | 2754843 - 2755088 | 9256.27 |
| amino acid abc transporter substrate-binding protein | DC415_12785 | Not Available | Negative | 2755234 - 2756130 | 33228.9 |
| amino acid abc transporter substrate-binding protein | DC415_12790 | Not Available | Negative | 2756133 - 2757041 | 33447.1 |
| ggdef domain-containing protein | DC415_12795 | Not Available | Negative | 2757085 - 2759295 | 80488.0 |
| 5,10-methylenetetrahydrofolate reductase | DC415_12800 | Not Available | Positive | 2759558 - 2760490 | 33544.3 |
| n-acetylglucosamine kinase | DC415_12805 | Not Available | Negative | 2760524 - 2761438 | 31278.9 |
| n-acetylglucosamine-6-phosphate deacetylase | DC415_12810 | Not Available | Negative | 2761435 - 2762616 | 40839.5 |
| aminotransferase | DC415_12815 | Not Available | Negative | 2762613 - 2763635 | 35356.6 |
| gntr family transcriptional regulator | DC415_12820 | Not Available | Negative | 2763659 - 2764408 | 27448.4 |
| oxidoreductase | DC415_12825 | Not Available | Positive | 2764879 - 2766057 | 43351.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


