Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna oxidative demethylase alkb | DC415_12680 | Not Available | Negative | 2731149 - 2731802 | 24089.7 |
| hypothetical protein | DC415_12685 | Not Available | Negative | 2731805 - 2732440 | 23464.0 |
| aldo/keto reductase | DC415_12690 | Not Available | Negative | 2732705 - 2733697 | 36364.3 |
| oxidoreductase | DC415_12695 | Not Available | Negative | 2733791 - 2734567 | 26678.0 |
| lysr family transcriptional regulator | DC415_12700 | Not Available | Positive | 2734677 - 2735597 | 33594.6 |
| serine/threonine protein phosphatase | DC415_12705 | Not Available | Positive | 2735768 - 2736490 | 26842.4 |
| dihydroxy-acid dehydratase | DC415_12710 | Not Available | Negative | 2736571 - 2738382 | 65190.9 |
| sugar abc transporter substrate-binding protein | DC415_12715 | Not Available | Positive | 2738878 - 2739837 | 34108.8 |
| sugar abc transporter atp-binding protein | DC415_12720 | Not Available | Positive | 2740012 - 2741535 | 55144.6 |
| sugar abc transporter permease | DC415_12725 | Not Available | Positive | 2741532 - 2742578 | 35584.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


