Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_12580 | Not Available | Positive | 2708112 - 2708393 | 10472.0 |
| carbohydrate abc transporter substrate-binding protein | DC415_12585 | Not Available | Positive | 2708474 - 2710195 | 63764.1 |
| llm class flavin-dependent oxidoreductase | DC415_12590 | Not Available | Negative | 2710329 - 2711351 | 37528.2 |
| proline/glycine betaine abc transporter atp-binding protein | DC415_12595 | Not Available | Negative | 2711443 - 2712531 | 39483.0 |
| proline/glycine betaine abc transporter permease | DC415_12600 | Not Available | Negative | 2712524 - 2713411 | 32862.5 |
| abc transporter substrate-binding protein | DC415_12605 | Not Available | Negative | 2713564 - 2714565 | 35764.4 |
| fructose-bisphosphate aldolase class ii | DC415_12610 | Not Available | Positive | 2714979 - 2716043 | 38610.5 |
| peroxiredoxin | DC415_12615 | Not Available | Positive | 2716229 - 2716888 | 24216.8 |
| glycosyl transferase family 1 | DC415_12620 | Not Available | Positive | 2717057 - 2718685 | 60396.5 |
| duf2171 domain-containing protein | DC415_12625 | Not Available | Negative | 2718763 - 2718996 | 8644.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


