Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin abc transporter atp-binding protein | DC415_12530 | Not Available | Negative | 2696060 - 2697667 | 58359.7 |
| peptide abc transporter permease | DC415_12535 | Not Available | Negative | 2697669 - 2698799 | 41447.7 |
| oligopeptide abc transporter permease oppb | DC415_12540 | Not Available | Negative | 2698792 - 2699715 | 33486.0 |
| abc transporter substrate-binding protein | DC415_12545 | Not Available | Negative | 2699776 - 2701374 | 59159.6 |
| deor/glpr transcriptional regulator | DC415_12550 | Not Available | Positive | 2701756 - 2702553 | 28874.4 |
| glycerol-3-phosphate dehydrogenase | DC415_12555 | Not Available | Positive | 2702636 - 2704144 | 56302.0 |
| abc transporter atp-binding protein | DC415_12560 | Not Available | Positive | 2704232 - 2705314 | 39373.6 |
| abc transporter atp-binding protein | DC415_12565 | Not Available | Positive | 2705327 - 2706397 | 39288.3 |
| sugar abc transporter permease | DC415_12570 | Not Available | Positive | 2706401 - 2707267 | 32289.2 |
| sugar abc transporter permease | DC415_12575 | Not Available | Positive | 2707282 - 2708097 | 30239.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


