Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ku protein | DC415_12425 | Not Available | Positive | 2673652 - 2674461 | 30668.9 |
| dna ligase d | DC415_12430 | Not Available | Negative | 2674468 - 2677140 | 98008.7 |
| atp-dependent dna helicase | DC415_12435 | Not Available | Positive | 2677375 - 2679441 | 77039.9 |
| hypothetical protein | DC415_12445 | Not Available | Positive | 2680148 - 2681050 | 30353.1 |
| hypothetical protein | DC415_12450 | Not Available | Negative | 2681100 - 2681438 | 12822.3 |
| hypothetical protein | DC415_12455 | Not Available | Negative | 2681419 - 2681610 | 7088.2 |
| hypothetical protein | DC415_12460 | Not Available | Positive | 2681712 - 2682272 | 21099.6 |
| hypothetical protein | DC415_12465 | Not Available | Negative | 2682399 - 2683226 | 30682.1 |
| hypothetical protein | DC415_12470 | Not Available | Negative | 2683229 - 2684155 | 35900.0 |
| hypothetical protein | DC415_12475 | Not Available | Positive | 2684377 - 2686539 | 80249.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


