Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DC415_12120 | Not Available | Positive | 2614503 - 2615090 | 21269.3 |
| duf1476 domain-containing protein | DC415_12125 | Not Available | Negative | 2615285 - 2615626 | 12558.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DC415_12130 | Not Available | Positive | 2615874 - 2616638 | 29000.3 |
| phosphoribosylformylglycinamidine synthase subunit purs | DC415_12135 | Not Available | Positive | 2616656 - 2616898 | 8546.48 |
| phosphoribosylformylglycinamidine synthase subunit purq | DC415_12140 | Not Available | Positive | 2617018 - 2617689 | 24006.0 |
| hypothetical protein | DC415_12145 | Not Available | Positive | 2617756 - 2618160 | 14126.2 |
| xanthine phosphoribosyltransferase | DC415_12150 | Not Available | Positive | 2618345 - 2618842 | 18307.1 |
| redox-sensitive transcriptional activator soxr | DC415_12155 | Not Available | Negative | 2618948 - 2619415 | 17183.8 |
| histidine phosphatase family protein | DC415_12160 | Not Available | Negative | 2619603 - 2620181 | 21240.0 |
| vitamin b12-dependent ribonucleotide reductase | DC415_12165 | Not Available | Positive | 2620938 - 2624741 | 138581.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


