Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit alpha | DC415_11965 | Not Available | Positive | 2572973 - 2575855 | 105510.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | DC415_11970 | Not Available | Positive | 2575865 - 2576689 | 29380.3 |
| formate dehydrogenase | DC415_11975 | Not Available | Positive | 2576679 - 2577023 | 12038.3 |
| mfs transporter | DC415_11980 | Not Available | Positive | 2577198 - 2578850 | 57855.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | DC415_11985 | Not Available | Negative | 2578926 - 2579567 | 23397.5 |
| 5'/3'-nucleotidase sure | DC415_11990 | Not Available | Negative | 2579576 - 2580352 | 28135.6 |
| serine--trna ligase | DC415_11995 | Not Available | Negative | 2580493 - 2581776 | 47549.6 |
| twin-arginine translocase subunit tatc | DC415_12000 | Not Available | Negative | 2581872 - 2582684 | 30230.9 |
| twin-arginine translocase subunit tatb | DC415_12005 | Not Available | Negative | 2582681 - 2583514 | 28876.0 |
| twin-arginine translocase tata/tate family subunit | DC415_12010 | Not Available | Negative | 2583604 - 2583816 | 7620.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


