Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DC415_11865 | Not Available | Positive | 2550417 - 2551625 | 43166.4 |
| inositol monophosphatase | DC415_11870 | Not Available | Negative | 2551701 - 2552525 | 29781.7 |
| inositol monophosphatase | DC415_11875 | Not Available | Negative | 2552550 - 2553377 | 29341.2 |
| trna 2-thiocytidine(32) synthetase ttca | DC415_11880 | Not Available | Negative | 2553422 - 2554300 | 32739.8 |
| glutaminase | DC415_11885 | Not Available | Negative | 2554369 - 2555298 | 33150.8 |
| peptidoglycan-binding protein | DC415_11890 | Not Available | Negative | 2555359 - 2557260 | 69007.7 |
| class ii fumarate hydratase | DC415_11895 | Not Available | Positive | 2557667 - 2559058 | 49255.8 |
| ggdef domain-containing protein | DC415_11900 | Not Available | Positive | 2559322 - 2560392 | 39926.3 |
| flavin-nucleotide-binding protein | DC415_11905 | Not Available | Negative | 2560440 - 2561048 | 22264.8 |
| potassium transporter | DC415_11910 | Not Available | Negative | 2561088 - 2562905 | 64286.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


