Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | DC415_00885 | Not Available | Negative | 181280 - 181891 | 21606.6 |
| duf2256 domain-containing protein | DC415_00890 | Not Available | Positive | 182021 - 182161 | 5581.93 |
| act domain-containing protein | DC415_00895 | Not Available | Negative | 182204 - 182482 | 10322.4 |
| acetylglutamate kinase | DC415_00900 | Not Available | Negative | 182604 - 183917 | 48395.0 |
| sugar abc transporter substrate-binding protein | DC415_00905 | Not Available | Negative | 184113 - 185432 | 48159.9 |
| carbohydrate abc transporter permease | DC415_00910 | Not Available | Negative | 185528 - 186376 | 30877.4 |
| sugar abc transporter permease | DC415_00915 | Not Available | Negative | 186376 - 187317 | 35096.7 |
| abc transporter atp-binding protein | DC415_00920 | Not Available | Negative | 187310 - 188410 | 39446.5 |
| alpha-n-arabinofuranosidase | DC415_00925 | Not Available | Negative | 188455 - 189966 | 56339.2 |
| arsr family transcriptional regulator | DC415_00930 | Not Available | Negative | 190139 - 191065 | 33739.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


