Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | DC415_11765 | Not Available | Negative | 2531519 - 2532772 | 45902.7 |
| fe-s cluster assembly protein sufd | DC415_11770 | Not Available | Negative | 2532765 - 2534036 | 45781.2 |
| fe-s cluster assembly atpase sufc | DC415_11775 | Not Available | Negative | 2534061 - 2534816 | 27206.0 |
| fe-s cluster assembly protein sufb | DC415_11780 | Not Available | Negative | 2534997 - 2536466 | 54811.9 |
| cysteine desulfurase | DC415_11785 | Not Available | Negative | 2536668 - 2537837 | 40545.9 |
| alpha/beta hydrolase | DC415_11790 | Not Available | Positive | 2538049 - 2538726 | 25037.0 |
| gnat family n-acetyltransferase | DC415_11795 | Not Available | Negative | 2538827 - 2539372 | 20875.8 |
| tyrosine--trna ligase | DC415_11800 | Not Available | Positive | 2539547 - 2540800 | 46260.4 |
| hypothetical protein | DC415_11805 | Not Available | Negative | 2540886 - 2541311 | 15973.3 |
| voc family virulence protein | DC415_11810 | Not Available | Negative | 2541504 - 2541980 | 17170.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


