Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_11405 | Not Available | Negative | 2454633 - 2454926 | 10362.8 |
| dna polymerase iv | DC415_11410 | Not Available | Positive | 2455077 - 2456174 | 39980.9 |
| dna polymerase iii subunit epsilon | DC415_11415 | Not Available | Positive | 2456178 - 2456954 | 29028.7 |
| hypothetical protein | DC415_11420 | Not Available | Positive | 2456951 - 2457304 | 13332.7 |
| glutathione abc transporter atp-binding protein gsia | DC415_11425 | Not Available | Positive | 2457797 - 2459611 | 67111.7 |
| peptide abc transporter substrate-binding protein | DC415_11430 | Not Available | Positive | 2459651 - 2461186 | 56032.2 |
| abc transporter permease | DC415_11435 | Not Available | Positive | 2461390 - 2462184 | 28525.6 |
| abc transporter permease | DC415_11440 | Not Available | Positive | 2462191 - 2463039 | 30494.1 |
| peptidase m14 | DC415_11445 | Not Available | Positive | 2463045 - 2464778 | 64779.3 |
| sulfatase | DC415_11450 | Not Available | Negative | 2464799 - 2466391 | 57752.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


