Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | DC415_11255 | Not Available | Negative | 2419624 - 2420517 | 32955.1 |
| lysr family transcriptional regulator | DC415_11260 | Not Available | Negative | 2420699 - 2421610 | 33882.0 |
| lipase | DC415_11265 | Not Available | Positive | 2421750 - 2422547 | 28643.0 |
| efflux transporter periplasmic adaptor subunit | DC415_11270 | Not Available | Positive | 2422598 - 2423788 | 41579.8 |
| multidrug efflux rnd transporter permease subunit | DC415_11275 | Not Available | Positive | 2423912 - 2427103 | 113735.0 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | DC415_11280 | Not Available | Positive | 2427396 - 2428700 | 46839.4 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | DC415_11285 | Not Available | Positive | 2428780 - 2429661 | 32288.8 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | DC415_11290 | Not Available | Positive | 2429671 - 2430519 | 31827.3 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | DC415_11295 | Not Available | Positive | 2430519 - 2431568 | 38042.0 |
| asparaginase | DC415_11300 | Not Available | Negative | 2431633 - 2432616 | 34388.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


