Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_11200 | Not Available | Positive | 2403920 - 2405821 | 69303.5 |
| tetr family transcriptional regulator | DC415_11205 | Not Available | Negative | 2405961 - 2406599 | 24780.4 |
| n-methylproline demethylase | DC415_11210 | Not Available | Positive | 2406742 - 2408778 | 74756.3 |
| hypothetical protein | DC415_11215 | Not Available | Positive | 2408953 - 2412258 | 119830.0 |
| hydroxyacid dehydrogenase | DC415_11220 | Not Available | Negative | 2412331 - 2413356 | 37487.4 |
| hypothetical protein | DC415_11225 | Not Available | Negative | 2413529 - 2414416 | 31349.9 |
| rna polymerase subunit sigma | DC415_11230 | Not Available | Positive | 2414521 - 2415066 | 20564.7 |
| anti-sigma factor | DC415_11235 | Not Available | Positive | 2415063 - 2415761 | 25359.3 |
| hypothetical protein | DC415_11240 | Not Available | Positive | 2415979 - 2416278 | 10898.6 |
| ribosome small subunit-dependent gtpase a | DC415_11250 | Not Available | Positive | 2418450 - 2419460 | 36130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


