Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | DC415_11050 | Not Available | Positive | 2366624 - 2366827 | 6965.21 |
| yihy/virulence factor brkb family protein | DC415_11055 | Not Available | Negative | 2366989 - 2367978 | 36033.1 |
| hypothetical protein | DC415_11060 | Not Available | Positive | 2368181 - 2368411 | 8152.72 |
| hypothetical protein | DC415_11065 | Not Available | Negative | 2368601 - 2369812 | 44051.4 |
| histidine kinase | DC415_11070 | Not Available | Positive | 2370095 - 2371564 | 55591.0 |
| atp-dependent dna helicase | DC415_11075 | Not Available | Positive | 2371925 - 2373991 | 76930.0 |
| transcriptional regulator | DC415_11080 | Not Available | Negative | 2374099 - 2374740 | 23944.9 |
| zn-dependent hydrolase | DC415_11085 | Not Available | Negative | 2374939 - 2376177 | 44037.7 |
| aspartate aminotransferase family protein | DC415_11090 | Not Available | Negative | 2376215 - 2377549 | 48336.0 |
| aminotransferase | DC415_11095 | Not Available | Negative | 2377546 - 2378631 | 40100.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


