Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonates abc transporter substrate-binding protein | DC415_10895 | Not Available | Negative | 2326853 - 2327818 | 34227.1 |
| alkanesulfonate monooxygenase | DC415_10900 | Not Available | Positive | 2328262 - 2329344 | 39673.5 |
| taurine abc transporter substrate-binding protein | DC415_10905 | Not Available | Positive | 2329602 - 2330615 | 35428.2 |
| taurine abc transporter atp-binding subunit | DC415_10910 | Not Available | Positive | 2330682 - 2331485 | 28770.8 |
| taurine abc transporter permease | DC415_10915 | Not Available | Positive | 2331482 - 2332339 | 30051.8 |
| 2-dehydropantoate 2-reductase | DC415_10920 | Not Available | Positive | 2332724 - 2333788 | 37891.9 |
| tetr/acrr family transcriptional regulator | DC415_10925 | Not Available | Positive | 2333798 - 2334382 | 20752.8 |
| 2-hydroxychromene-2-carboxylate isomerase | DC415_10930 | Not Available | Positive | 2334379 - 2334981 | 22104.0 |
| 2-hydroxy-acid oxidase | DC415_10935 | Not Available | Positive | 2335090 - 2336463 | 48405.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | DC415_10940 | Not Available | Positive | 2336503 - 2338869 | 86716.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


