Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circadian clock protein kaic | DC415_10830 | Not Available | Positive | 2313506 - 2315014 | 55927.2 |
| hybrid sensor histidine kinase/response regulator | DC415_10835 | Not Available | Positive | 2314956 - 2317091 | 77137.2 |
| rraa family protein | DC415_10840 | Not Available | Negative | 2317376 - 2318047 | 23384.5 |
| hypothetical protein | DC415_10845 | Not Available | Negative | 2318074 - 2318697 | 21787.2 |
| aliphatic sulfonate abc transporter atp-binding protein | DC415_10860 | Not Available | Positive | 2320397 - 2321188 | 28041.1 |
| esterase | DC415_10865 | Not Available | Negative | 2321380 - 2321973 | 21553.8 |
| alkanesulfonate monooxygenase, fmnh(2)-dependent | DC415_10870 | Not Available | Negative | 2322042 - 2323247 | 42790.7 |
| hypothetical protein | DC415_10880 | Not Available | Negative | 2324871 - 2325062 | 7258.65 |
| abc transporter atp-binding protein | DC415_10885 | Not Available | Negative | 2325236 - 2326003 | 28012.9 |
| abc transporter permease | DC415_10890 | Not Available | Negative | 2326005 - 2326841 | 30300.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


