Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | DC415_10775 | Not Available | Positive | 2300762 - 2302579 | 66371.0 |
| amidohydrolase | DC415_10780 | Not Available | Positive | 2302607 - 2304037 | 50736.5 |
| abc transporter substrate-binding protein | DC415_10785 | Not Available | Positive | 2304120 - 2305730 | 59061.5 |
| peptide abc transporter permease | DC415_10790 | Not Available | Positive | 2305742 - 2306818 | 39346.6 |
| d,d-dipeptide abc transporter permease | DC415_10795 | Not Available | Positive | 2306825 - 2307769 | 33870.3 |
| peptide abc transporter atp-binding protein | DC415_10800 | Not Available | Positive | 2307762 - 2308628 | 32328.7 |
| abc transporter atp-binding protein | DC415_10805 | Not Available | Positive | 2308625 - 2309410 | 29059.1 |
| serine hydrolase | DC415_10810 | Not Available | Positive | 2309536 - 2310417 | 32634.2 |
| 2-methylcitrate dehydratase | DC415_10815 | Not Available | Positive | 2310511 - 2311872 | 47246.3 |
| lysr family transcriptional regulator | DC415_10820 | Not Available | Negative | 2311876 - 2312808 | 34748.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


