Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase | DC415_10575 | Not Available | Negative | 2256981 - 2257667 | 24418.5 |
| 3-oxoadipate coa-transferase | DC415_10580 | Not Available | Negative | 2257679 - 2258401 | 25512.8 |
| iclr family transcriptional regulator | DC415_10585 | Not Available | Positive | 2258536 - 2259297 | 27025.2 |
| 4-hydroxybenzoate 3-monooxygenase | DC415_10590 | Not Available | Negative | 2259313 - 2260485 | 43383.6 |
| acyl-coa synthetase | DC415_10595 | Not Available | Negative | 2260548 - 2262044 | 53158.6 |
| p-hydroxycinnamoyl coa hydratase/lyase | DC415_10600 | Not Available | Negative | 2262076 - 2262915 | 30983.0 |
| salicylaldehyde dehydrogenase | DC415_10605 | Not Available | Negative | 2262969 - 2264381 | 48458.5 |
| marr family transcriptional regulator | DC415_10610 | Not Available | Positive | 2264527 - 2264967 | 16492.8 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | DC415_10615 | Not Available | Positive | 2265161 - 2266393 | 42309.2 |
| 3-keto-5-aminohexanoate cleavage protein | DC415_10620 | Not Available | Negative | 2266641 - 2268542 | 70808.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


