Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_10470 | Not Available | Negative | 2235113 - 2235400 | 10486.3 |
| cytochrome c | DC415_10475 | Not Available | Negative | 2236146 - 2237462 | 47479.3 |
| gmc family oxidoreductase | DC415_10480 | Not Available | Negative | 2237474 - 2239243 | 65757.0 |
| gluconate 2-dehydrogenase | DC415_10485 | Not Available | Negative | 2239247 - 2239951 | 25732.6 |
| amidohydrolase | DC415_10490 | Not Available | Negative | 2240394 - 2241863 | 52341.8 |
| peptide abc transporter substrate-binding protein | DC415_10495 | Not Available | Negative | 2241968 - 2243509 | 56381.4 |
| serine hydrolase | DC415_10500 | Not Available | Negative | 2243549 - 2244409 | 31499.0 |
| peptide abc transporter atp-binding protein | DC415_10505 | Not Available | Negative | 2244427 - 2246055 | 59994.3 |
| abc transporter permease | DC415_10510 | Not Available | Negative | 2246052 - 2246870 | 28794.2 |
| peptide abc transporter | DC415_10515 | Not Available | Negative | 2246867 - 2247811 | 34371.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


