Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | DC415_10415 | Not Available | Negative | 2223626 - 2226526 | 101448.0 |
| dihydrodipicolinate synthase family protein | DC415_10420 | Not Available | Negative | 2226541 - 2227434 | 32034.6 |
| abc transporter permease | DC415_10425 | Not Available | Negative | 2227457 - 2228149 | 26012.8 |
| amino acid abc transporter | DC415_10430 | Not Available | Negative | 2228218 - 2229042 | 29232.4 |
| gntr family transcriptional regulator | DC415_10435 | Not Available | Negative | 2229213 - 2229854 | 23285.1 |
| gntr family transcriptional regulator | DC415_10440 | Not Available | Positive | 2229992 - 2230660 | 24776.0 |
| type ii toxin-antitoxin system hipa family toxin | DC415_10445 | Not Available | Negative | 2230860 - 2232104 | 45704.2 |
| transcriptional regulator | DC415_10450 | Not Available | Negative | 2232117 - 2232383 | 9741.63 |
| oxidoreductase | DC415_10455 | Not Available | Positive | 2232700 - 2233671 | 34240.5 |
| hypothetical protein | DC415_10465 | Not Available | Negative | 2234632 - 2234964 | 11843.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


