Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_10360 | Not Available | Positive | 2210376 - 2210831 | 16752.3 |
| hypothetical protein | DC415_10365 | Not Available | Positive | 2210831 - 2212195 | 49288.9 |
| hypothetical protein | DC415_10370 | Not Available | Positive | 2212425 - 2214932 | 91760.4 |
| hypothetical protein | DC415_10375 | Not Available | Positive | 2214944 - 2216035 | 41357.4 |
| hypothetical protein | DC415_10380 | Not Available | Negative | 2216165 - 2216512 | 13185.2 |
| hypothetical protein | DC415_10385 | Not Available | Negative | 2216697 - 2218532 | 68176.5 |
| is3 family transposase | DC415_10395 | Not Available | Positive | 2219881 - 2220983 | 42577.3 |
| duf3830 domain-containing protein | DC415_10400 | Not Available | Negative | 2221050 - 2221460 | 14924.9 |
| dihydropyrimidinase | DC415_10405 | Not Available | Negative | 2221482 - 2222891 | 50756.2 |
| amino acid abc transporter atp-binding protein | DC415_10410 | Not Available | Negative | 2222901 - 2223629 | 26751.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


