Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | DC415_10210 | Not Available | Negative | 2172378 - 2172929 | 20235.2 |
| glycine--trna ligase subunit alpha | DC415_10215 | Not Available | Negative | 2173055 - 2174017 | 36022.6 |
| glycine--trna ligase subunit beta | DC415_10220 | Not Available | Positive | 2174238 - 2176391 | 78412.0 |
| duf523 domain-containing protein | DC415_10225 | Not Available | Positive | 2176407 - 2176892 | 16774.2 |
| chemotaxis protein | DC415_10230 | Not Available | Negative | 2176948 - 2178777 | 66167.6 |
| hypothetical protein | DC415_10235 | Not Available | Negative | 2179019 - 2179453 | 15198.1 |
| phosphoribosylamine--glycine ligase | DC415_10240 | Not Available | Negative | 2179594 - 2180865 | 44639.2 |
| rna-binding transcriptional accessory protein | DC415_10245 | Not Available | Positive | 2181040 - 2183352 | 83643.6 |
| sam-dependent methyltransferase | DC415_10250 | Not Available | Positive | 2183505 - 2184761 | 47519.3 |
| 4-hydroxybenzoate octaprenyltransferase | DC415_10255 | Not Available | Positive | 2184857 - 2185810 | 34767.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


