Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DC415_10160 | Not Available | Negative | 2160620 - 2161528 | 32187.8 |
| tetratricopeptide repeat protein | DC415_10165 | Not Available | Negative | 2161535 - 2163370 | 66498.8 |
| polyprenyl synthetase | DC415_10170 | Not Available | Negative | 2163620 - 2164636 | 36671.0 |
| hypothetical protein | DC415_10175 | Not Available | Positive | 2164748 - 2164975 | 8355.1 |
| methyltransferase | DC415_10180 | Not Available | Positive | 2164982 - 2165773 | 28585.1 |
| s49 family peptidase | DC415_10185 | Not Available | Positive | 2165971 - 2166741 | 27545.6 |
| hypothetical protein | DC415_10190 | Not Available | Positive | 2166756 - 2166950 | 7207.79 |
| duf2207 domain-containing protein | DC415_10195 | Not Available | Negative | 2167046 - 2168953 | 69522.3 |
| duf2207 domain-containing protein | DC415_10200 | Not Available | Negative | 2169091 - 2171013 | 68519.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DC415_10205 | Not Available | Negative | 2171072 - 2172337 | 44188.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


