Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DC415_10060 | Not Available | Negative | 2140424 - 2141053 | 21649.4 |
| 2-dehydro-3-deoxygalactonokinase | DC415_10065 | Not Available | Negative | 2141068 - 2141985 | 32528.8 |
| 3-oxoacyl-acp reductase | DC415_10070 | Not Available | Negative | 2141985 - 2142755 | 27230.7 |
| iclr family transcriptional regulator | DC415_10075 | Not Available | Positive | 2142854 - 2143675 | 29905.0 |
| luxr family transcriptional regulator | DC415_10080 | Not Available | Positive | 2143838 - 2144578 | 27379.9 |
| abc transporter permease | DC415_10085 | Not Available | Positive | 2144654 - 2145877 | 44077.4 |
| iron-sulfur cluster carrier protein apbc | DC415_10090 | Not Available | Positive | 2146044 - 2147174 | 39586.4 |
| magnesium and cobalt transport protein cora | DC415_10095 | Not Available | Positive | 2147502 - 2148479 | 36384.1 |
| potassium transporter kup | DC415_10100 | Not Available | Positive | 2148495 - 2150411 | 70281.9 |
| cell wall hydrolase | DC415_10105 | Not Available | Positive | 2150592 - 2151761 | 42858.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


