Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_01961 | DC415_09960 | Not Available | Negative | 2120066 - 2120518 | Not Available |
| pseudouridine synthase | DC415_09965 | Not Available | Positive | 2120591 - 2122603 | 72158.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DC415_09970 | Not Available | Positive | 2122603 - 2123160 | 20163.2 |
| patatin-like phospholipase family protein | DC415_09975 | Not Available | Positive | 2123284 - 2124222 | 33754.5 |
| modulator protein | DC415_09980 | Not Available | Positive | 2124314 - 2125660 | 47526.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | DC415_09985 | Not Available | Positive | 2125751 - 2126557 | 29082.6 |
| duf4170 domain-containing protein | DC415_09990 | Not Available | Positive | 2126629 - 2126865 | 8967.81 |
| 3-deoxy-d-manno-octulosonic acid transferase | DC415_09995 | Not Available | Positive | 2127075 - 2128391 | 49098.4 |
| haloacid dehalogenase | DC415_10000 | Not Available | Positive | 2128414 - 2129136 | 25011.7 |
| tetraacyldisaccharide 4'-kinase | DC415_10005 | Not Available | Positive | 2129259 - 2130290 | 36873.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


