Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DC415_09910 | Not Available | Positive | 2108811 - 2109263 | 16708.5 |
| steroid delta-isomerase | DC415_09915 | Not Available | Negative | 2109322 - 2109681 | 13876.7 |
| chaperonin groel | DC415_09920 | Not Available | Negative | 2109906 - 2111540 | 57685.7 |
| co-chaperone groes | DC415_09925 | Not Available | Negative | 2111616 - 2111912 | 10560.8 |
| chromate transporter | DC415_09930 | Not Available | Positive | 2112082 - 2113401 | 47476.4 |
| tigr01459 family had-type hydrolase | DC415_09935 | Not Available | Positive | 2113505 - 2114353 | 30048.0 |
| bifunctional riboflavin kinase/fad synthetase | DC415_09940 | Not Available | Positive | 2114466 - 2115446 | 35546.5 |
| isoleucine--trna ligase | DC415_09945 | Not Available | Positive | 2115718 - 2118621 | 108260.0 |
| hypothetical protein | DC415_09950 | Not Available | Positive | 2118857 - 2119489 | 23223.0 |
| gnat family n-acetyltransferase | DC415_09955 | Not Available | Positive | 2119571 - 2120053 | 17563.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


