Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_13520 | Not Available | Negative | 2905163 - 2905708 | 20049.1 |
| Contractile tail sheath protein | DC415_13525 | Not Available | Negative | 2905721 - 2906977 | 44407.2 |
| Attl | Not Available | Not Available | Positive | 2907043 - 2907061 | Not Available |
| Variable tail fiber protein | DC415_13540 | Not Available | Negative | 2908152 - 2909597 | 51476.7 |
| Hypothetical protein | DC415_13545 | Not Available | Negative | 2909760 - 2912021 | 82290.7 |
| Tail protein | DC415_13550 | Not Available | Negative | 2912033 - 2912698 | 24592.5 |
| Baseplate assembly protein | DC415_13555 | Not Available | Negative | 2912695 - 2913633 | 33534.1 |
| Putative baseplate assembly protein w | DC415_13560 | Not Available | Negative | 2913630 - 2914025 | 14397.5 |
| hypothetical protein | DC415_13565 | Not Available | Negative | 2914038 - 2914262 | 7888.08 |
| Putative baseplate assembly protein v | DC415_13570 | Not Available | Negative | 2914275 - 2914925 | 23133.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


