Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | DC415_09660 | Not Available | Negative | 2053027 - 2054313 | 46759.7 |
| glutamine synthetase | DC415_09665 | Not Available | Negative | 2054324 - 2055760 | 53386.7 |
| aminoacetone oxidase family fad-binding enzyme | DC415_09670 | Not Available | Positive | 2055888 - 2057072 | 42355.1 |
| lysr family transcriptional regulator | DC415_09675 | Not Available | Positive | 2057685 - 2058554 | 32314.7 |
| hypothetical protein | DC415_09680 | Not Available | Negative | 2058551 - 2058796 | 8720.39 |
| isocitrate lyase | DC415_09685 | Not Available | Negative | 2058899 - 2060188 | 47007.6 |
| cro/cl family transcriptional regulator | DC415_09690 | Not Available | Positive | 2060429 - 2061847 | 51664.3 |
| spermidine/putrescine abc transporter substrate-binding protein potf | DC415_09695 | Not Available | Positive | 2062033 - 2063130 | 40332.8 |
| polyamine abc transporter atp-binding protein | DC415_09700 | Not Available | Positive | 2063211 - 2064368 | 42846.9 |
| putrescine/spermidine abc transporter permease | DC415_09705 | Not Available | Positive | 2064380 - 2065288 | 33751.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


