Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 2015155 - 2015229 | Not Available |
| hypothetical protein | DC415_09465 | Not Available | Positive | 2015371 - 2015604 | 8557.05 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DC415_09470 | Not Available | Positive | 2015780 - 2017072 | 45733.4 |
| duf2948 domain-containing protein | DC415_09475 | Not Available | Positive | 2017251 - 2017688 | 15808.9 |
| histidinol dehydrogenase | DC415_09480 | Not Available | Positive | 2017833 - 2019131 | 45853.7 |
| hypothetical protein | DC415_09485 | Not Available | Positive | 2019135 - 2019608 | 17735.2 |
| protein-tyrosine-phosphatase | DC415_09490 | Not Available | Positive | 2019668 - 2020090 | 15808.9 |
| translation initiation factor if-1 | DC415_09495 | Not Available | Positive | 2020198 - 2020416 | 8372.33 |
| maf-like protein | DC415_09500 | Not Available | Positive | 2020447 - 2021070 | 22774.6 |
| dna gyrase inhibitor yacg | DC415_09505 | Not Available | Positive | 2021076 - 2021291 | 8126.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


