Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | DC415_09410 | Not Available | Positive | 2006896 - 2007477 | 21507.7 |
| dna-binding response regulator | DC415_09415 | Not Available | Positive | 2007759 - 2008430 | 25204.2 |
| flagellar hook protein flge | DC415_09420 | Not Available | Positive | 2008645 - 2009922 | 44079.1 |
| flagellar hook-associated protein flgk | DC415_09425 | Not Available | Positive | 2009943 - 2011385 | 50253.5 |
| flagellar hook-associated family protein | DC415_09430 | Not Available | Positive | 2011387 - 2012400 | 35699.3 |
| flagellar biosynthesis regulator flhf | DC415_09435 | Not Available | Positive | 2012455 - 2012802 | 13671.4 |
| flagellar biosynthesis repressor flbt | DC415_09440 | Not Available | Positive | 2012799 - 2013245 | 17033.9 |
| flagellar hook assembly protein flgd | DC415_09445 | Not Available | Positive | 2013239 - 2013652 | 14084.5 |
| flagellar biosynthetic protein fliq | DC415_09450 | Not Available | Positive | 2013757 - 2014023 | 9373.77 |
| hypothetical protein | DC415_09455 | Not Available | Positive | 2014836 - 2015096 | 9384.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


