Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel protein mscl | DC415_09310 | Not Available | Positive | 1984771 - 1985214 | 15905.6 |
| aspartate aminotransferase | DC415_09315 | Not Available | Positive | 1985311 - 1986483 | 42323.6 |
| hypothetical protein | DC415_09320 | Not Available | Negative | 1986710 - 1987159 | 16528.4 |
| flagellar biosynthesis protein flhb | DC415_09325 | Not Available | Negative | 1987165 - 1988244 | 40400.3 |
| flagellar motor switch protein flig | DC415_09330 | Not Available | Negative | 1988469 - 1989515 | 38037.0 |
| flagellar motor switch protein flin | DC415_09335 | Not Available | Negative | 1989543 - 1990046 | 17364.6 |
| flagellar motor switch protein flim | DC415_09340 | Not Available | Negative | 1990112 - 1991068 | 34651.1 |
| flagellar motor stator protein mota | DC415_09345 | Not Available | Negative | 1991070 - 1991942 | 31310.8 |
| flagellar basal-body rod protein flgf | DC415_09350 | Not Available | Positive | 1992224 - 1992958 | 26056.8 |
| flagellar protein export atpase flii | DC415_09355 | Not Available | Positive | 1992974 - 1994365 | 49831.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


