Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 1 | DC415_00625 | Not Available | Positive | 137585 - 139330 | 64654.0 |
| hypothetical protein | DC415_00630 | Not Available | Negative | 139308 - 139514 | 7774.47 |
| acyl-coa thioesterase | DC415_00635 | Not Available | Positive | 139795 - 140178 | 13890.8 |
| porin family protein | DC415_00640 | Not Available | Negative | 140456 - 141133 | 23837.7 |
| hypothetical protein | DC415_00645 | Not Available | Negative | 141386 - 141754 | 13991.6 |
| xre family transcriptional regulator | DC415_00650 | Not Available | Negative | 141993 - 142592 | 21667.0 |
| hypothetical protein | DC415_00655 | Not Available | Positive | 142677 - 143015 | 12124.6 |
| hypothetical protein | DC415_00660 | Not Available | Positive | 143012 - 143191 | 6874.18 |
| hypothetical protein | DC415_00665 | Not Available | Positive | 143184 - 143414 | 8560.24 |
| hypothetical protein | DC415_00670 | Not Available | Positive | 143898 - 144104 | 7542.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


