Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | DC415_09160 | Not Available | Negative | 1941635 - 1941979 | 12445.4 |
| k+/h+ antiporter subunit f | DC415_09165 | Not Available | Negative | 1941976 - 1942257 | 10304.0 |
| na+/h+ antiporter subunit e | DC415_09170 | Not Available | Negative | 1942254 - 1942739 | 18087.6 |
| monovalent cation/h+ antiporter subunit d | DC415_09175 | Not Available | Negative | 1942739 - 1944385 | 57647.9 |
| na+/h+ antiporter subunit c | DC415_09180 | Not Available | Negative | 1944382 - 1944717 | 11543.5 |
| monovalent cation/h+ antiporter subunit a | DC415_09185 | Not Available | Negative | 1944717 - 1947635 | 106383.0 |
| globin-coupled sensor protein | DC415_09190 | Not Available | Positive | 1948764 - 1950308 | 56514.9 |
| stas domain-containing protein | DC415_09195 | Not Available | Positive | 1950308 - 1950601 | 10442.8 |
| response regulator | DC415_09200 | Not Available | Positive | 1950604 - 1950969 | 13428.2 |
| chemotaxis protein chea | DC415_09205 | Not Available | Positive | 1950986 - 1953262 | 80816.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


