Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DC415_09110 | Not Available | Negative | 1929357 - 1930043 | 24965.0 |
| sensor histidine kinase kdpd | DC415_09115 | Not Available | Negative | 1930089 - 1932803 | 98429.0 |
| potassium-transporting atpase subunit c | DC415_09120 | Not Available | Negative | 1932809 - 1933378 | 19538.5 |
| k(+)-transporting atpase subunit b | DC415_09125 | Not Available | Negative | 1933381 - 1935432 | 71110.6 |
| potassium-transporting atpase subunit kdpa | DC415_09130 | Not Available | Negative | 1935444 - 1937153 | 59561.3 |
| k(+)-transporting atpase subunit f | DC415_09135 | Not Available | Negative | 1937172 - 1937258 | 3158.15 |
| hypothetical protein | DC415_09140 | Not Available | Positive | 1937368 - 1937571 | 7343.8 |
| ornithine cyclodeaminase | DC415_09145 | Not Available | Positive | 1937568 - 1938503 | 32749.1 |
| zn-dependent hydrolase | DC415_09150 | Not Available | Positive | 1938750 - 1940000 | 44624.2 |
| dihydropyrimidinase | DC415_09155 | Not Available | Positive | 1940126 - 1941583 | 52940.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


