Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | DC415_08760 | Not Available | Positive | 1857417 - 1858334 | 33694.6 |
| hsp33 family molecular chaperone | DC415_08765 | Not Available | Positive | 1858595 - 1859581 | 35906.2 |
| co2+/mg2+ efflux protein apag | DC415_08770 | Not Available | Negative | 1859609 - 1860001 | 14490.7 |
| o-succinylhomoserine sulfhydrylase | DC415_08775 | Not Available | Negative | 1860289 - 1861473 | 42496.8 |
| 2'-deoxycytidine 5'-triphosphate deaminase | DC415_08780 | Not Available | Positive | 1861669 - 1862766 | 39820.7 |
| Trna-gly | Not Available | Not Available | Positive | 1862851 - 1862924 | Not Available |
| integrase | DC415_08790 | Not Available | Positive | 1863098 - 1864294 | 45072.4 |
| hypothetical protein | DC415_08795 | Not Available | Positive | 1864548 - 1865834 | 47935.4 |
| hypothetical protein | DC415_08800 | Not Available | Negative | 1865815 - 1866897 | 39437.5 |
| hypothetical protein | DC415_08805 | Not Available | Negative | 1866890 - 1867543 | 23942.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


