Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching enzyme glgx | DC415_00570 | Not Available | Negative | 117428 - 119398 | 72211.0 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | DC415_00580 | Not Available | Negative | 119705 - 121336 | 57910.6 |
| glycogen synthase glga | DC415_00585 | Not Available | Negative | 121337 - 122779 | 51764.1 |
| glucose-1-phosphate adenylyltransferase | DC415_00590 | Not Available | Negative | 122785 - 124047 | 46978.8 |
| 1,4-alpha-glucan branching enzyme | DC415_00595 | Not Available | Negative | 124168 - 126375 | 83591.1 |
| glycogen phosphorylase | DC415_00600 | Not Available | Negative | 126375 - 128837 | 92464.6 |
| hypothetical protein | DC415_00605 | Not Available | Negative | 129164 - 130429 | 45317.3 |
| transglutaminase | DC415_00610 | Not Available | Negative | 130640 - 131518 | 31774.9 |
| hypothetical protein | DC415_00615 | Not Available | Negative | 131522 - 133897 | 87801.0 |
| imp dehydrogenase | DC415_00620 | Not Available | Negative | 133944 - 137294 | 124190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


