Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DC415_08655 | Not Available | Positive | 1838841 - 1839503 | 23926.7 |
| duf2177 domain-containing protein | DC415_08660 | Not Available | Positive | 1839532 - 1839930 | 14243.6 |
| yqae/pmp3 family membrane protein | DC415_08665 | Not Available | Negative | 1839981 - 1840139 | 5837.73 |
| hypothetical protein | DC415_08670 | Not Available | Negative | 1840690 - 1840998 | 11518.6 |
| hypothetical protein | DC415_08675 | Not Available | Negative | 1841292 - 1841684 | 14726.1 |
| hypothetical protein | DC415_08680 | Not Available | Negative | 1841681 - 1842406 | 27425.7 |
| Trna-thr | Not Available | Not Available | Positive | 1842626 - 1842701 | Not Available |
| nitronate monooxygenase | DC415_08690 | Not Available | Negative | 1842825 - 1843784 | 33413.1 |
| hypothetical protein | DC415_08695 | Not Available | Positive | 1844093 - 1845307 | 43566.1 |
| polyphosphate kinase 2 | DC415_08700 | Not Available | Negative | 1845411 - 1846292 | 34199.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


