Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | DC415_08605 | Not Available | Negative | 1827362 - 1829074 | 62528.0 |
| abc transporter atp-binding protein | DC415_08610 | Not Available | Positive | 1829337 - 1830395 | 38524.5 |
| iron abc transporter substrate-binding protein | DC415_08615 | Not Available | Positive | 1830539 - 1831564 | 36461.5 |
| iron abc transporter permease | DC415_08620 | Not Available | Positive | 1831683 - 1833374 | 60161.9 |
| photosystem reaction center subunit h | DC415_08625 | Not Available | Positive | 1833484 - 1833876 | 15103.5 |
| duf982 domain-containing protein | DC415_08630 | Not Available | Negative | 1834100 - 1834345 | 9269.94 |
| sam-dependent methyltransferase | DC415_08635 | Not Available | Negative | 1834650 - 1835864 | 46124.9 |
| duf1365 domain-containing protein | DC415_08640 | Not Available | Negative | 1835868 - 1836677 | 31115.6 |
| nad/fad-binding protein | DC415_08645 | Not Available | Negative | 1836677 - 1838035 | 49591.8 |
| rna polymerase subunit sigma | DC415_08650 | Not Available | Positive | 1838275 - 1838844 | 21742.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


