Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_08455 | Not Available | Negative | 1795823 - 1796416 | 22059.3 |
| pyrimidine 5'-nucleotidase | DC415_08460 | Not Available | Negative | 1796526 - 1797245 | 26901.1 |
| eama/rhat family transporter | DC415_08465 | Not Available | Positive | 1797349 - 1798266 | 32414.5 |
| acetylglutamate kinase | DC415_08470 | Not Available | Negative | 1798288 - 1799172 | 31044.2 |
| hypothetical protein | DC415_08475 | Not Available | Positive | 1799413 - 1799790 | 14343.3 |
| yiha family ribosome biogenesis gtp-binding protein | DC415_08480 | Not Available | Negative | 1799812 - 1800459 | 23612.5 |
| membrane protein insertase yidc | DC415_08485 | Not Available | Negative | 1800456 - 1802270 | 67725.9 |
| ribonuclease p protein component | DC415_08490 | Not Available | Negative | 1802270 - 1802653 | 14662.8 |
| 50s ribosomal protein l34 | DC415_08495 | Not Available | Negative | 1802685 - 1802822 | 5122.45 |
| chemotaxis protein | DC415_08500 | Not Available | Positive | 1803190 - 1805199 | 71271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


