Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | DC415_08255 | Not Available | Positive | 1755969 - 1756925 | 34790.2 |
| integration host factor subunit beta | DC415_08260 | Not Available | Positive | 1756952 - 1757257 | 11394.5 |
| lapa family protein | DC415_08265 | Not Available | Positive | 1757342 - 1757683 | 12415.4 |
| sam-dependent methyltransferase | DC415_08270 | Not Available | Positive | 1757877 - 1759010 | 41680.8 |
| rna methyltransferase | DC415_08275 | Not Available | Positive | 1759007 - 1759864 | 30796.4 |
| signal peptidase ii | DC415_08280 | Not Available | Positive | 1759864 - 1760358 | 18262.9 |
| ornithine--acyl-acp n-acyltransferase olsb | DC415_08285 | Not Available | Positive | 1760489 - 1761370 | 32674.3 |
| dna mismatch repair protein muts | DC415_08290 | Not Available | Positive | 1761552 - 1764203 | 95782.0 |
| [protein-pii] uridylyltransferase | DC415_08295 | Not Available | Positive | 1764289 - 1767117 | 106177.0 |
| murein biosynthesis integral membrane protein murj | DC415_08300 | Not Available | Positive | 1767125 - 1768717 | 56868.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


