Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-[acyl-carrier-protein] reductase fabi | DC415_08105 | Not Available | Positive | 1726130 - 1726936 | 28682.2 |
| hypothetical protein | DC415_08110 | Not Available | Negative | 1726961 - 1727188 | 9171.46 |
| pilus assembly protein tadg | DC415_08115 | Not Available | Positive | 1727199 - 1727768 | 21376.0 |
| hypothetical protein | DC415_08120 | Not Available | Positive | 1727782 - 1728363 | 21062.6 |
| mfs transporter | DC415_08125 | Not Available | Negative | 1728515 - 1729834 | 47574.0 |
| ubiquinol oxidase subunit ii | DC415_08130 | Not Available | Positive | 1730135 - 1731226 | 39659.2 |
| cytochrome o ubiquinol oxidase subunit i | DC415_08135 | Not Available | Positive | 1731292 - 1733298 | 74108.0 |
| cytochrome o ubiquinol oxidase subunit iii | DC415_08140 | Not Available | Positive | 1733302 - 1733928 | 23112.4 |
| cytochrome o ubiquinol oxidase subunit iv | DC415_08145 | Not Available | Positive | 1733928 - 1734341 | 15616.3 |
| surfeit locus 1 family protein | DC415_08150 | Not Available | Positive | 1734477 - 1735250 | 28405.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


