Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | DC415_08050 | Not Available | Positive | 1717254 - 1718612 | 49672.9 |
| gamma-glutamylputrescine oxidoreductase | DC415_08055 | Not Available | Positive | 1718616 - 1719917 | 46975.3 |
| gluconokinase | DC415_08060 | Not Available | Negative | 1719912 - 1720397 | 17286.0 |
| glyoxalase | DC415_08070 | Not Available | Positive | 1720955 - 1721395 | 15509.7 |
| duf1275 domain-containing protein | DC415_08075 | Not Available | Positive | 1721547 - 1722263 | 25455.0 |
| hypothetical protein | DC415_08080 | Not Available | Negative | 1722268 - 1722741 | 17742.5 |
| trimeric intracellular cation channel family protein | DC415_08085 | Not Available | Positive | 1722913 - 1723548 | 22050.3 |
| transcriptional repressor | DC415_08090 | Not Available | Negative | 1723603 - 1724022 | 15563.7 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba | DC415_08095 | Not Available | Positive | 1724320 - 1724835 | 19062.1 |
| beta-ketoacyl-acp synthase i | DC415_08100 | Not Available | Positive | 1724900 - 1726123 | 43120.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


