Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thif | DC415_07950 | Not Available | Negative | 1694070 - 1694828 | 27165.8 |
| dna replication/repair protein recf | DC415_07955 | Not Available | Negative | 1694866 - 1695990 | 41025.8 |
| hypothetical protein | DC415_07960 | Not Available | Positive | 1696193 - 1697302 | 39679.6 |
| nucleoside/nucleotide kinase family protein | DC415_07965 | Not Available | Negative | 1697364 - 1697999 | 23292.7 |
| sugar abc transporter atp-binding protein | DC415_07970 | Not Available | Negative | 1697996 - 1698778 | 28328.5 |
| abc transporter permease | DC415_07975 | Not Available | Negative | 1698790 - 1699854 | 37180.2 |
| sugar abc transporter substrate-binding protein | DC415_07980 | Not Available | Negative | 1699989 - 1701011 | 35113.1 |
| sugar kinase | DC415_07985 | Not Available | Positive | 1701275 - 1702507 | 44607.8 |
| sulfolactate dehydrogenase | DC415_07990 | Not Available | Negative | 1702533 - 1703522 | 34130.1 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | DC415_07995 | Not Available | Negative | 1703698 - 1704333 | 23339.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


