Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DC415_07795 | Not Available | Positive | 1660739 - 1662025 | 44629.5 |
| acriflavine resistance protein b | DC415_07800 | Not Available | Positive | 1662022 - 1665153 | 110720.0 |
| cytochrome c family protein | DC415_07805 | Not Available | Negative | 1665319 - 1665903 | 20176.9 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DC415_07810 | Not Available | Positive | 1666054 - 1666809 | 27829.6 |
| prephenate dehydratase | DC415_07815 | Not Available | Positive | 1666820 - 1667680 | 31685.9 |
| nad(+) diphosphatase | DC415_07820 | Not Available | Negative | 1667775 - 1668743 | 35852.6 |
| diadenosine tetraphosphate hydrolase | DC415_07825 | Not Available | Negative | 1668743 - 1669147 | 14873.0 |
| dna polymerase iii subunit gamma/tau | DC415_07835 | Not Available | Positive | 1669455 - 1671329 | 67491.6 |
| ybab/ebfc family nucleoid-associated protein | DC415_07840 | Not Available | Positive | 1671405 - 1671728 | 11534.3 |
| mosc domain-containing protein | DC415_07845 | Not Available | Negative | 1671768 - 1672379 | 22037.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


