Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | DC415_07545 | Not Available | Positive | 1609203 - 1609685 | 17509.7 |
| histidine kinase | DC415_07550 | Not Available | Positive | 1609845 - 1610963 | 41785.7 |
| response regulator | DC415_07555 | Not Available | Positive | 1610966 - 1611376 | 14338.3 |
| hybrid sensor histidine kinase/response regulator | DC415_07560 | Not Available | Positive | 1611376 - 1613403 | 73860.4 |
| molecular chaperone dnak | DC415_07565 | Not Available | Positive | 1613668 - 1615572 | 67825.4 |
| molecular chaperone dnaj | DC415_07570 | Not Available | Positive | 1615662 - 1616792 | 40767.0 |
| duf924 domain-containing protein | DC415_07575 | Not Available | Negative | 1616858 - 1617412 | 21184.8 |
| hypothetical protein | DC415_07580 | Not Available | Negative | 1617459 - 1617671 | 8107.52 |
| hypothetical protein | DC415_07585 | Not Available | Negative | 1617786 - 1619291 | 52529.7 |
| tripartite tricarboxylate transporter tctb family protein | DC415_07590 | Not Available | Negative | 1619301 - 1619762 | 16715.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


